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pages.zh/linux/treetime.md
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pages.zh/linux/treetime.md
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# treetime
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> TreeTime 提供了祖先序列重建和分子钟系统发育推断的例程。
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> 更多信息:<https://treetime.readthedocs.io/en/latest/tutorials.html>。
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- 推断最大化联合或边际似然的祖先序列:
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`treetime ancestral`
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- 分析重复突变的模式,也称为同源性:
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`treetime homoplasy`
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- 估计分子钟参数并重新根植树形:
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`treetime clock`
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- 将离散特征(如宿主或国家)映射到树上:
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`treetime mugration`
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